Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pfdn6Q03958 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Gm4875-201ENSMUST00000118257 786 ntBASIC13.61□□□□□ -0.23
Pfdn6Q03958 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.61□□□□□ -0.23
Pfdn6Q03958 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.61□□□□□ -0.23
Pfdn6Q03958 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.61□□□□□ -0.23
Pfdn6Q03958 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.61□□□□□ -0.23
Pfdn6Q03958 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.61□□□□□ -0.23
Pfdn6Q03958 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pfdn6Q03958 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Gm15770-201ENSMUST00000117498 584 ntBASIC13.6□□□□□ -0.23
Pfdn6Q03958 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Gm25925-201ENSMUST00000158314 306 ntBASIC13.6□□□□□ -0.23
Pfdn6Q03958 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Gm27306-201ENSMUST00000183970 107 ntBASIC13.6□□□□□ -0.23
Pfdn6Q03958 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.6□□□□□ -0.23
Pfdn6Q03958 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.6□□□□□ -0.23
Pfdn6Q03958 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pfdn6Q03958 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Acot6-202ENSMUST00000222921 3622 ntBASIC13.59□□□□□ -0.23
Pfdn6Q03958 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.59□□□□□ -0.23
Pfdn6Q03958 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.59□□□□□ -0.23
Pfdn6Q03958 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.59□□□□□ -0.23
Pfdn6Q03958 Mir7684-201ENSMUST00000183858 60 ntBASIC13.59□□□□□ -0.23
Pfdn6Q03958 Mir8102-201ENSMUST00000184148 139 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms