Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smn1P97801 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smn1P97801 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smn1P97801 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Smn1P97801 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smn1P97801 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.6□□□□□ -0.55
Smn1P97801 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Smn1P97801 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smn1P97801 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smn1P97801 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.59□□□□□ -0.55
Smn1P97801 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.59□□□□□ -0.55
Smn1P97801 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Smn1P97801 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
Smn1P97801 Rprl2-201ENSMUST00000157150 290 ntBASIC11.59□□□□□ -0.55
Smn1P97801 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.59□□□□□ -0.55
Smn1P97801 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Smn1P97801 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.59□□□□□ -0.55
Smn1P97801 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Gm18049-201ENSMUST00000208909 581 ntBASIC11.59□□□□□ -0.55
Smn1P97801 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.59□□□□□ -0.55
Smn1P97801 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Smn1P97801 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smn1P97801 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Smn1P97801 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.58□□□□□ -0.55
Smn1P97801 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Smn1P97801 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smn1P97801 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Smn1P97801 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Smn1P97801 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Smn1P97801 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.58□□□□□ -0.56
Smn1P97801 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.58□□□□□ -0.56
Smn1P97801 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.58□□□□□ -0.56
Smn1P97801 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.58□□□□□ -0.56
Smn1P97801 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.58□□□□□ -0.56
Smn1P97801 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.58□□□□□ -0.56
Smn1P97801 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.58□□□□□ -0.56
Smn1P97801 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Smn1P97801 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Smn1P97801 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Smn1P97801 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.58□□□□□ -0.56
Smn1P97801 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smn1P97801 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms