Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Npas1P97459 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Npas1P97459 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Npas1P97459 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.35□□□□□ -0.59
Npas1P97459 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Npas1P97459 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.35□□□□□ -0.59
Npas1P97459 Gm12350-201ENSMUST00000121208 462 ntBASIC11.35□□□□□ -0.59
Npas1P97459 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Npas1P97459 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
Npas1P97459 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Gm27920-201ENSMUST00000183953 96 ntBASIC11.35□□□□□ -0.59
Npas1P97459 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.35□□□□□ -0.59
Npas1P97459 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.35□□□□□ -0.59
Npas1P97459 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.35□□□□□ -0.59
Npas1P97459 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.35□□□□□ -0.59
Npas1P97459 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Npas1P97459 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Npas1P97459 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Npas1P97459 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.35□□□□□ -0.59
Npas1P97459 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.35□□□□□ -0.59
Npas1P97459 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Npas1P97459 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Npas1P97459 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Npas1P97459 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.34□□□□□ -0.59
Npas1P97459 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.34□□□□□ -0.59
Npas1P97459 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.34□□□□□ -0.59
Npas1P97459 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.34□□□□□ -0.59
Npas1P97459 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.34□□□□□ -0.59
Npas1P97459 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Npas1P97459 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.34□□□□□ -0.59
Npas1P97459 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Npas1P97459 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.34□□□□□ -0.59
Npas1P97459 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.34□□□□□ -0.59
Npas1P97459 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Npas1P97459 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Npas1P97459 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Npas1P97459 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Npas1P97459 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Npas1P97459 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Npas1P97459 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.33□□□□□ -0.6
Npas1P97459 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Npas1P97459 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Npas1P97459 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Npas1P97459 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.33□□□□□ -0.6
Npas1P97459 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Npas1P97459 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.33□□□□□ -0.6
Npas1P97459 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms