Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.06□□□□□ -0.48
H3f3aP84244 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.05□□□□□ -0.48
H3f3aP84244 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
H3f3aP84244 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
H3f3aP84244 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
H3f3aP84244 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
H3f3aP84244 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.05□□□□□ -0.48
H3f3aP84244 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.05□□□□□ -0.48
H3f3aP84244 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Gm18307-201ENSMUST00000206864 949 ntBASIC12.05□□□□□ -0.48
H3f3aP84244 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.05□□□□□ -0.48
H3f3aP84244 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.05□□□□□ -0.48
H3f3aP84244 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H3f3aP84244 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H3f3aP84244 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
H3f3aP84244 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.05□□□□□ -0.48
H3f3aP84244 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
H3f3aP84244 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H3f3aP84244 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.04□□□□□ -0.48
H3f3aP84244 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.04□□□□□ -0.48
H3f3aP84244 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.04□□□□□ -0.48
H3f3aP84244 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.04□□□□□ -0.48
H3f3aP84244 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.04□□□□□ -0.48
H3f3aP84244 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.04□□□□□ -0.48
H3f3aP84244 Gm12403-201ENSMUST00000121384 959 ntBASIC12.04□□□□□ -0.48
H3f3aP84244 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.04□□□□□ -0.48
H3f3aP84244 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
H3f3aP84244 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
H3f3aP84244 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.04□□□□□ -0.48
H3f3aP84244 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.04□□□□□ -0.48
H3f3aP84244 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.04□□□□□ -0.48
H3f3aP84244 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.04□□□□□ -0.48
H3f3aP84244 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.04□□□□□ -0.48
H3f3aP84244 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
H3f3aP84244 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H3f3aP84244 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.04□□□□□ -0.48
H3f3aP84244 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
H3f3aP84244 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
H3f3aP84244 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H3f3aP84244 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3aP84244 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3aP84244 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
H3f3aP84244 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3aP84244 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3aP84244 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3aP84244 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3aP84244 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H3f3aP84244 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
H3f3aP84244 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms