Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Stra8P70278 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC18.71■□□□□ 0.59
Stra8P70278 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.71■□□□□ 0.59
Stra8P70278 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Stra8P70278 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stra8P70278 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Stra8P70278 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Stra8P70278 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.7■□□□□ 0.58
Stra8P70278 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Stra8P70278 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Stra8P70278 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Stra8P70278 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.7■□□□□ 0.58
Stra8P70278 Gm15693-201ENSMUST00000120470 637 ntBASIC18.7■□□□□ 0.58
Stra8P70278 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Stra8P70278 Gm27622-201ENSMUST00000183779 60 ntBASIC18.7■□□□□ 0.58
Stra8P70278 Gm28630-201ENSMUST00000187806 498 ntBASIC18.7■□□□□ 0.58
Stra8P70278 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Stra8P70278 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 AC154725.1-201ENSMUST00000224826 1961 ntBASIC18.7■□□□□ 0.58
Stra8P70278 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Stra8P70278 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Stra8P70278 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Stra8P70278 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Stra8P70278 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Gm24543-201ENSMUST00000103867 82 ntBASIC18.69■□□□□ 0.58
Stra8P70278 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Mir6956-201ENSMUST00000183598 62 ntBASIC18.69■□□□□ 0.58
Stra8P70278 AA619741-201ENSMUST00000195095 646 ntBASIC18.69■□□□□ 0.58
Stra8P70278 Gm45453-201ENSMUST00000211758 853 ntBASIC18.69■□□□□ 0.58
Stra8P70278 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.69■□□□□ 0.58
Stra8P70278 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Stra8P70278 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Stra8P70278 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Gm20632-201ENSMUST00000176760 2427 ntBASIC18.69■□□□□ 0.58
Stra8P70278 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stra8P70278 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Stra8P70278 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Stra8P70278 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
Stra8P70278 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Stra8P70278 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stra8P70278 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms