Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ybx1P62960 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ybx1P62960 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ybx1P62960 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ybx1P62960 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ybx1P62960 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ybx1P62960 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ybx1P62960 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ybx1P62960 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ybx1P62960 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ybx1P62960 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ybx1P62960 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ybx1P62960 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ybx1P62960 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ybx1P62960 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ybx1P62960 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ybx1P62960 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ybx1P62960 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.83□□□□□ -0.2
Ybx1P62960 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ybx1P62960 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ybx1P62960 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.83□□□□□ -0.2
Ybx1P62960 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.83□□□□□ -0.2
Ybx1P62960 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ybx1P62960 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.83□□□□□ -0.2
Ybx1P62960 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.83□□□□□ -0.2
Ybx1P62960 Gm38144-201ENSMUST00000192790 465 ntBASIC13.83□□□□□ -0.2
Ybx1P62960 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.83□□□□□ -0.2
Ybx1P62960 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.83□□□□□ -0.2
Ybx1P62960 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Gm10268-201ENSMUST00000085340 555 ntBASIC13.83□□□□□ -0.2
Ybx1P62960 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ybx1P62960 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.83□□□□□ -0.2
Ybx1P62960 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Ybx1P62960 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ybx1P62960 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.83□□□□□ -0.2
Ybx1P62960 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ybx1P62960 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Ybx1P62960 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ybx1P62960 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ybx1P62960 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.82□□□□□ -0.2
Ybx1P62960 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.82□□□□□ -0.2
Ybx1P62960 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Ybx1P62960 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Mir686-201ENSMUST00000102174 109 ntBASIC13.82□□□□□ -0.2
Ybx1P62960 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.82□□□□□ -0.2
Ybx1P62960 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.82□□□□□ -0.2
Ybx1P62960 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
Ybx1P62960 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Gm7029-201ENSMUST00000173226 450 ntBASIC13.82□□□□□ -0.2
Ybx1P62960 Gm7584-201ENSMUST00000175829 940 ntBASIC13.82□□□□□ -0.2
Ybx1P62960 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Gm38241-201ENSMUST00000192641 898 ntBASIC13.82□□□□□ -0.2
Ybx1P62960 Gm37497-201ENSMUST00000195830 798 ntBASIC13.82□□□□□ -0.2
Ybx1P62960 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.82□□□□□ -0.2
Ybx1P62960 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.82□□□□□ -0.2
Ybx1P62960 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.82□□□□□ -0.2
Ybx1P62960 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Snora73a-201ENSMUST00000082453 205 ntBASIC13.82□□□□□ -0.2
Ybx1P62960 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ybx1P62960 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Ybx1P62960 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ybx1P62960 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms