Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Sec61a1P61620 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sec61a1P61620 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.95□□□□□ -0.5
Sec61a1P61620 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Sec61a1P61620 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.95□□□□□ -0.5
Sec61a1P61620 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sec61a1P61620 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.95□□□□□ -0.5
Sec61a1P61620 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sec61a1P61620 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Sec61a1P61620 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Sec61a1P61620 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.94□□□□□ -0.5
Sec61a1P61620 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.94□□□□□ -0.5
Sec61a1P61620 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.94□□□□□ -0.5
Sec61a1P61620 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sec61a1P61620 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm29310-201ENSMUST00000185468 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21825-201ENSMUST00000185728 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm29109-201ENSMUST00000185895 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21896-201ENSMUST00000186520 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21873-201ENSMUST00000186728 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21794-201ENSMUST00000187056 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21880-201ENSMUST00000187275 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21826-201ENSMUST00000187451 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21198-201ENSMUST00000188393 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21749-201ENSMUST00000189343 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21901-201ENSMUST00000189568 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm29424-201ENSMUST00000189716 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm28599-201ENSMUST00000189838 694 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21867-201ENSMUST00000189917 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm29269-201ENSMUST00000190087 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21722-201ENSMUST00000190153 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm28423-201ENSMUST00000190701 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21899-201ENSMUST00000190745 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21910-201ENSMUST00000191163 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21849-201ENSMUST00000191571 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm28678-201ENSMUST00000191593 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm20910-201ENSMUST00000193268 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm21871-201ENSMUST00000194621 696 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.94□□□□□ -0.5
Sec61a1P61620 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sec61a1P61620 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.94□□□□□ -0.5
Sec61a1P61620 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Sec61a1P61620 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.94□□□□□ -0.5
Sec61a1P61620 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sec61a1P61620 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sec61a1P61620 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms