Protein–RNA interactions for Protein: P60824

Cirbp, Cold-inducible RNA-binding protein, mousemouse

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CirbpP60824 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CirbpP60824 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CirbpP60824 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CirbpP60824 Matn2-206ENSMUST00000228570 2798 ntBASIC9.95□□□□□ -0.82
CirbpP60824 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC9.95□□□□□ -0.82
CirbpP60824 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
CirbpP60824 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.95□□□□□ -0.82
CirbpP60824 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CirbpP60824 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CirbpP60824 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC9.94□□□□□ -0.82
CirbpP60824 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC9.94□□□□□ -0.82
CirbpP60824 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 AC164107.1-201ENSMUST00000227730 2161 ntBASIC9.94□□□□□ -0.82
CirbpP60824 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CirbpP60824 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Gm11405-201ENSMUST00000118689 1556 ntBASIC9.94□□□□□ -0.82
CirbpP60824 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CirbpP60824 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
CirbpP60824 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC9.94□□□□□ -0.82
CirbpP60824 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.94□□□□□ -0.82
CirbpP60824 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.94□□□□□ -0.82
CirbpP60824 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Gm29667-201ENSMUST00000190817 490 ntBASIC9.94□□□□□ -0.82
CirbpP60824 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CirbpP60824 Gm18041-201ENSMUST00000218210 618 ntBASIC9.94□□□□□ -0.82
CirbpP60824 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.94□□□□□ -0.82
CirbpP60824 AC121804.3-201ENSMUST00000223420 295 ntBASIC9.94□□□□□ -0.82
CirbpP60824 AC102291.3-201ENSMUST00000226566 405 ntBASIC9.94□□□□□ -0.82
CirbpP60824 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.94□□□□□ -0.82
CirbpP60824 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
CirbpP60824 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
CirbpP60824 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
CirbpP60824 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CirbpP60824 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CirbpP60824 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
CirbpP60824 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CirbpP60824 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.93□□□□□ -0.82
CirbpP60824 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CirbpP60824 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CirbpP60824 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CirbpP60824 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
CirbpP60824 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
CirbpP60824 Gm12500-202ENSMUST00000186471 2428 ntBASIC9.93□□□□□ -0.82
CirbpP60824 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CirbpP60824 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CirbpP60824 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CirbpP60824 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CirbpP60824 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.93□□□□□ -0.82
CirbpP60824 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
CirbpP60824 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CirbpP60824 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.93□□□□□ -0.82
CirbpP60824 Gm5866-201ENSMUST00000177881 973 ntBASIC9.93□□□□□ -0.82
CirbpP60824 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC9.93□□□□□ -0.82
CirbpP60824 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC9.93□□□□□ -0.82
CirbpP60824 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9.93□□□□□ -0.82
CirbpP60824 Gm44608-201ENSMUST00000206827 855 ntBASIC9.93□□□□□ -0.82
CirbpP60824 Gm7730-201ENSMUST00000212486 454 ntBASIC9.93□□□□□ -0.82
CirbpP60824 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CirbpP60824 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
CirbpP60824 Wdyhv1-206ENSMUST00000227142 786 ntBASIC9.93□□□□□ -0.82
CirbpP60824 CT025535.1-201ENSMUST00000227172 491 ntBASIC9.93□□□□□ -0.82
CirbpP60824 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
CirbpP60824 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms