Protein–RNA interactions for Protein: P58321

Uchl4, Ubiquitin carboxyl-terminal hydrolase isozyme L4, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl4P58321 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Uchl4P58321 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Uchl4P58321 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uchl4P58321 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Uchl4P58321 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.38□□□□□ -0.11
Uchl4P58321 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Gm15770-201ENSMUST00000117498 584 ntBASIC14.38□□□□□ -0.11
Uchl4P58321 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Uchl4P58321 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Uchl4P58321 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.38□□□□□ -0.11
Uchl4P58321 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.38□□□□□ -0.11
Uchl4P58321 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.38□□□□□ -0.11
Uchl4P58321 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.38□□□□□ -0.11
Uchl4P58321 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Uchl4P58321 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.38□□□□□ -0.11
Uchl4P58321 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.38□□□□□ -0.11
Uchl4P58321 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.38□□□□□ -0.11
Uchl4P58321 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Uchl4P58321 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uchl4P58321 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Uchl4P58321 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Uchl4P58321 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Uchl4P58321 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.37□□□□□ -0.11
Uchl4P58321 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.37□□□□□ -0.11
Uchl4P58321 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.37□□□□□ -0.11
Uchl4P58321 Gm15429-201ENSMUST00000151268 798 ntBASIC14.37□□□□□ -0.11
Uchl4P58321 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.37□□□□□ -0.11
Uchl4P58321 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Uchl4P58321 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Uchl4P58321 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Uchl4P58321 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.37□□□□□ -0.11
Uchl4P58321 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.37□□□□□ -0.11
Uchl4P58321 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.37□□□□□ -0.11
Uchl4P58321 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uchl4P58321 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uchl4P58321 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uchl4P58321 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uchl4P58321 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uchl4P58321 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Uchl4P58321 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uchl4P58321 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uchl4P58321 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uchl4P58321 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uchl4P58321 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uchl4P58321 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uchl4P58321 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms