Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lim2P56563 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lim2P56563 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lim2P56563 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lim2P56563 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lim2P56563 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lim2P56563 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lim2P56563 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lim2P56563 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Lim2P56563 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lim2P56563 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lim2P56563 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lim2P56563 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lim2P56563 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Lim2P56563 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
Lim2P56563 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.53□□□□□ -0.24
Lim2P56563 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.53□□□□□ -0.24
Lim2P56563 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.53□□□□□ -0.24
Lim2P56563 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.53□□□□□ -0.24
Lim2P56563 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lim2P56563 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.53□□□□□ -0.24
Lim2P56563 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.53□□□□□ -0.24
Lim2P56563 Gm9908-201ENSMUST00000211534 448 ntBASIC13.53□□□□□ -0.24
Lim2P56563 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lim2P56563 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.53□□□□□ -0.24
Lim2P56563 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.53□□□□□ -0.24
Lim2P56563 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.53□□□□□ -0.24
Lim2P56563 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lim2P56563 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Lim2P56563 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lim2P56563 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.53□□□□□ -0.24
Lim2P56563 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lim2P56563 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.53□□□□□ -0.24
Lim2P56563 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lim2P56563 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lim2P56563 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lim2P56563 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lim2P56563 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lim2P56563 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lim2P56563 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lim2P56563 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lim2P56563 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lim2P56563 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lim2P56563 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lim2P56563 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Lim2P56563 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Gm12490-201ENSMUST00000120255 560 ntBASIC13.52□□□□□ -0.25
Lim2P56563 Gm11424-201ENSMUST00000121929 829 ntBASIC13.52□□□□□ -0.25
Lim2P56563 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.52□□□□□ -0.25
Lim2P56563 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.52□□□□□ -0.25
Lim2P56563 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.52□□□□□ -0.25
Lim2P56563 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.52□□□□□ -0.25
Lim2P56563 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lim2P56563 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lim2P56563 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Lim2P56563 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.52□□□□□ -0.25
Lim2P56563 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.52□□□□□ -0.25
Lim2P56563 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.52□□□□□ -0.25
Lim2P56563 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lim2P56563 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lim2P56563 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms