Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.76□□□□□ -0.21
Sox1P53783 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sox1P53783 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox1P53783 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sox1P53783 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox1P53783 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.76□□□□□ -0.21
Sox1P53783 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Sox1P53783 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox1P53783 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox1P53783 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sox1P53783 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.75□□□□□ -0.21
Sox1P53783 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sox1P53783 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.75□□□□□ -0.21
Sox1P53783 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.75□□□□□ -0.21
Sox1P53783 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.75□□□□□ -0.21
Sox1P53783 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.75□□□□□ -0.21
Sox1P53783 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.75□□□□□ -0.21
Sox1P53783 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.75□□□□□ -0.21
Sox1P53783 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sox1P53783 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox1P53783 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox1P53783 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox1P53783 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox1P53783 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox1P53783 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox1P53783 BC037039-201ENSMUST00000192003 2205 ntBASIC13.74□□□□□ -0.21
Sox1P53783 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Sox1P53783 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox1P53783 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox1P53783 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Gm11930-201ENSMUST00000117788 190 ntBASIC13.74□□□□□ -0.21
Sox1P53783 Gm13408-201ENSMUST00000119822 798 ntBASIC13.74□□□□□ -0.21
Sox1P53783 Gm13935-201ENSMUST00000121859 798 ntBASIC13.74□□□□□ -0.21
Sox1P53783 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Sox1P53783 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox1P53783 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.74□□□□□ -0.21
Sox1P53783 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.74□□□□□ -0.21
Sox1P53783 Gm44405-201ENSMUST00000198952 126 ntBASIC13.74□□□□□ -0.21
Sox1P53783 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox1P53783 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.74□□□□□ -0.21
Sox1P53783 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.74□□□□□ -0.21
Sox1P53783 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox1P53783 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms