Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.68□□□□□ -0.38
Sox2P48432 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sox2P48432 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sox2P48432 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Sox2P48432 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Sox2P48432 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Sox2P48432 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox2P48432 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.67□□□□□ -0.38
Sox2P48432 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Sox2P48432 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sox2P48432 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox2P48432 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Sox2P48432 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox2P48432 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox2P48432 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.67□□□□□ -0.38
Sox2P48432 Rprl2-201ENSMUST00000157150 290 ntBASIC12.67□□□□□ -0.38
Sox2P48432 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox2P48432 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.67□□□□□ -0.38
Sox2P48432 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox2P48432 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox2P48432 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sox2P48432 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.67□□□□□ -0.38
Sox2P48432 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sox2P48432 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox2P48432 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox2P48432 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox2P48432 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sox2P48432 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox2P48432 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.66□□□□□ -0.38
Sox2P48432 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.66□□□□□ -0.38
Sox2P48432 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sox2P48432 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sox2P48432 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Sox2P48432 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Mir698-201ENSMUST00000102164 109 ntBASIC12.66□□□□□ -0.38
Sox2P48432 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sox2P48432 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Sox2P48432 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Sox2P48432 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Sox2P48432 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox2P48432 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sox2P48432 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.66□□□□□ -0.38
Sox2P48432 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sox2P48432 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox2P48432 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox2P48432 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms