Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rfx2P48379 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Rfx2P48379 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Rfx2P48379 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.19□□□□□ -0.14
Rfx2P48379 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rfx2P48379 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rfx2P48379 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.19□□□□□ -0.14
Rfx2P48379 Mir1894-201ENSMUST00000122802 81 ntBASIC14.19□□□□□ -0.14
Rfx2P48379 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.19□□□□□ -0.14
Rfx2P48379 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rfx2P48379 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx2P48379 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Rfx2P48379 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.18□□□□□ -0.14
Rfx2P48379 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.18□□□□□ -0.14
Rfx2P48379 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfx2P48379 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rfx2P48379 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rfx2P48379 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfx2P48379 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfx2P48379 Gm29741-201ENSMUST00000192667 421 ntBASIC14.18□□□□□ -0.14
Rfx2P48379 Gm44719-201ENSMUST00000206404 149 ntBASIC14.18□□□□□ -0.14
Rfx2P48379 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.18□□□□□ -0.14
Rfx2P48379 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.18□□□□□ -0.14
Rfx2P48379 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rfx2P48379 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx2P48379 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.18□□□□□ -0.14
Rfx2P48379 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfx2P48379 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.17□□□□□ -0.14
Rfx2P48379 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rfx2P48379 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.17□□□□□ -0.14
Rfx2P48379 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx2P48379 Mir698-201ENSMUST00000102164 109 ntBASIC14.17□□□□□ -0.14
Rfx2P48379 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.17□□□□□ -0.14
Rfx2P48379 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.17□□□□□ -0.14
Rfx2P48379 Gm6244-201ENSMUST00000178732 841 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms