Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.63□□□□□ -0.23
Fen1P39749 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Fen1P39749 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Fen1P39749 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Fen1P39749 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.62□□□□□ -0.23
Fen1P39749 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.62□□□□□ -0.23
Fen1P39749 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Fen1P39749 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Fen1P39749 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.62□□□□□ -0.23
Fen1P39749 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.62□□□□□ -0.23
Fen1P39749 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.62□□□□□ -0.23
Fen1P39749 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Fen1P39749 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Fen1P39749 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Fen1P39749 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Fen1P39749 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Fen1P39749 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Fen1P39749 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Fen1P39749 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.62□□□□□ -0.23
Fen1P39749 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fen1P39749 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Fen1P39749 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Fen1P39749 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Fen1P39749 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.61□□□□□ -0.23
Fen1P39749 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Fen1P39749 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.61□□□□□ -0.23
Fen1P39749 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Fen1P39749 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.61□□□□□ -0.23
Fen1P39749 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Fen1P39749 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.61□□□□□ -0.23
Fen1P39749 Gm18737-201ENSMUST00000173594 937 ntBASIC13.61□□□□□ -0.23
Fen1P39749 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.61□□□□□ -0.23
Fen1P39749 Gm10576-201ENSMUST00000191927 825 ntBASIC13.61□□□□□ -0.23
Fen1P39749 Gm29741-201ENSMUST00000192667 421 ntBASIC13.61□□□□□ -0.23
Fen1P39749 Gm38225-201ENSMUST00000194001 393 ntBASIC13.61□□□□□ -0.23
Fen1P39749 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Fen1P39749 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Fen1P39749 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Fen1P39749 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.61□□□□□ -0.23
Fen1P39749 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Fen1P39749 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Fen1P39749 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Fen1P39749 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Fen1P39749 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Fen1P39749 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.6□□□□□ -0.23
Fen1P39749 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fen1P39749 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.6□□□□□ -0.23
Fen1P39749 Gm6222-201ENSMUST00000120787 396 ntBASIC13.6□□□□□ -0.23
Fen1P39749 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms