Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Foxa1P35582 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Foxa1P35582 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.53□□□□□ -0.4
Foxa1P35582 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.53□□□□□ -0.4
Foxa1P35582 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxa1P35582 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Foxa1P35582 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Foxa1P35582 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxa1P35582 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Foxa1P35582 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Foxa1P35582 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxa1P35582 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.52□□□□□ -0.4
Foxa1P35582 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxa1P35582 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxa1P35582 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxa1P35582 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Foxa1P35582 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.52□□□□□ -0.4
Foxa1P35582 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxa1P35582 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxa1P35582 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Foxa1P35582 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Foxa1P35582 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.52□□□□□ -0.41
Foxa1P35582 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.52□□□□□ -0.41
Foxa1P35582 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.52□□□□□ -0.41
Foxa1P35582 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.52□□□□□ -0.41
Foxa1P35582 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Foxa1P35582 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.52□□□□□ -0.41
Foxa1P35582 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Foxa1P35582 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.52□□□□□ -0.41
Foxa1P35582 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Foxa1P35582 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.51□□□□□ -0.41
Foxa1P35582 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Foxa1P35582 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.51□□□□□ -0.41
Foxa1P35582 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Foxa1P35582 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.51□□□□□ -0.41
Foxa1P35582 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.51□□□□□ -0.41
Foxa1P35582 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.51□□□□□ -0.41
Foxa1P35582 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.51□□□□□ -0.41
Foxa1P35582 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.51□□□□□ -0.41
Foxa1P35582 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Gm18307-201ENSMUST00000206864 949 ntBASIC12.51□□□□□ -0.41
Foxa1P35582 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.51□□□□□ -0.41
Foxa1P35582 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.51□□□□□ -0.41
Foxa1P35582 Gm15823-201ENSMUST00000064305 670 ntBASIC12.51□□□□□ -0.41
Foxa1P35582 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Foxa1P35582 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.51□□□□□ -0.41
Foxa1P35582 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.51□□□□□ -0.41
Foxa1P35582 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Foxa1P35582 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.5□□□□□ -0.41
Foxa1P35582 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms