Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.1□□□□□ -0.15
H2afxP27661 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.1□□□□□ -0.15
H2afxP27661 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.1□□□□□ -0.15
H2afxP27661 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
H2afxP27661 Gm27300-201ENSMUST00000184085 97 ntBASIC14.1□□□□□ -0.15
H2afxP27661 Gm27335-201ENSMUST00000184758 97 ntBASIC14.1□□□□□ -0.15
H2afxP27661 Gm27704-201ENSMUST00000185094 107 ntBASIC14.1□□□□□ -0.15
H2afxP27661 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.1□□□□□ -0.15
H2afxP27661 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.1□□□□□ -0.15
H2afxP27661 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
H2afxP27661 Gm18027-201ENSMUST00000218947 619 ntBASIC14.1□□□□□ -0.15
H2afxP27661 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
H2afxP27661 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
H2afxP27661 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.1□□□□□ -0.15
H2afxP27661 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 BC001981-202ENSMUST00000191393 1545 ntBASIC14.1□□□□□ -0.15
H2afxP27661 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.1□□□□□ -0.15
H2afxP27661 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afxP27661 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.09□□□□□ -0.15
H2afxP27661 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
H2afxP27661 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
H2afxP27661 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
H2afxP27661 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
H2afxP27661 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.09□□□□□ -0.15
H2afxP27661 Mir7221-201ENSMUST00000184009 72 ntBASIC14.09□□□□□ -0.15
H2afxP27661 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.09□□□□□ -0.15
H2afxP27661 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.09□□□□□ -0.15
H2afxP27661 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
H2afxP27661 Gm7461-201ENSMUST00000058918 827 ntBASIC14.09□□□□□ -0.15
H2afxP27661 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.09□□□□□ -0.15
H2afxP27661 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
H2afxP27661 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
H2afxP27661 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afxP27661 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afxP27661 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afxP27661 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afxP27661 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
H2afxP27661 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
H2afxP27661 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afxP27661 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afxP27661 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H2afxP27661 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
H2afxP27661 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
H2afxP27661 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
H2afxP27661 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
H2afxP27661 Gm6550-201ENSMUST00000187574 993 ntBASIC14.08□□□□□ -0.16
H2afxP27661 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afxP27661 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
H2afxP27661 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afxP27661 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afxP27661 Mir497b-201ENSMUST00000093601 125 ntBASIC14.08□□□□□ -0.16
H2afxP27661 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H2afxP27661 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms