Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.52□□□□□ -0.41
Cd40lgP27548 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Cd40lgP27548 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.52□□□□□ -0.41
Cd40lgP27548 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Cd40lgP27548 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cd40lgP27548 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Cd40lgP27548 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cd40lgP27548 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cd40lgP27548 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.52□□□□□ -0.41
Cd40lgP27548 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cd40lgP27548 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Gm15321-201ENSMUST00000121290 288 ntBASIC12.51□□□□□ -0.41
Cd40lgP27548 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.51□□□□□ -0.41
Cd40lgP27548 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.51□□□□□ -0.41
Cd40lgP27548 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Gm2423-201ENSMUST00000074863 733 ntBASIC12.51□□□□□ -0.41
Cd40lgP27548 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.51□□□□□ -0.41
Cd40lgP27548 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.51□□□□□ -0.41
Cd40lgP27548 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cd40lgP27548 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.51□□□□□ -0.41
Cd40lgP27548 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cd40lgP27548 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.5□□□□□ -0.41
Cd40lgP27548 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.5□□□□□ -0.41
Cd40lgP27548 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cd40lgP27548 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cd40lgP27548 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Cd40lgP27548 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cd40lgP27548 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd40lgP27548 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.5□□□□□ -0.41
Cd40lgP27548 Gm29741-201ENSMUST00000192667 421 ntBASIC12.5□□□□□ -0.41
Cd40lgP27548 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.5□□□□□ -0.41
Cd40lgP27548 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.5□□□□□ -0.41
Cd40lgP27548 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.5□□□□□ -0.41
Cd40lgP27548 Gm17795-201ENSMUST00000214505 757 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms