Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm15770-201ENSMUST00000117498 584 ntBASIC11.3□□□□□ -0.6
Col8a2P25318 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.3□□□□□ -0.6
Col8a2P25318 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col8a2P25318 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.3□□□□□ -0.6
Col8a2P25318 Gm6266-201ENSMUST00000203844 806 ntBASIC11.3□□□□□ -0.6
Col8a2P25318 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.3□□□□□ -0.6
Col8a2P25318 Gm6983-201ENSMUST00000214912 628 ntBASIC11.3□□□□□ -0.6
Col8a2P25318 Gm8598-201ENSMUST00000221184 836 ntBASIC11.3□□□□□ -0.6
Col8a2P25318 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Col8a2P25318 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.3□□□□□ -0.6
Col8a2P25318 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.3□□□□□ -0.6
Col8a2P25318 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Col8a2P25318 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Col8a2P25318 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col8a2P25318 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.29□□□□□ -0.6
Col8a2P25318 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Col8a2P25318 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Gm13829-201ENSMUST00000119600 138 ntBASIC11.29□□□□□ -0.6
Col8a2P25318 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.29□□□□□ -0.6
Col8a2P25318 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Gm43438-201ENSMUST00000198133 379 ntBASIC11.29□□□□□ -0.6
Col8a2P25318 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.29□□□□□ -0.6
Col8a2P25318 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.29□□□□□ -0.6
Col8a2P25318 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.29□□□□□ -0.6
Col8a2P25318 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Col8a2P25318 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.29□□□□□ -0.6
Col8a2P25318 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Col8a2P25318 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Col8a2P25318 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col8a2P25318 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col8a2P25318 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.28□□□□□ -0.6
Col8a2P25318 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Col8a2P25318 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.28□□□□□ -0.6
Col8a2P25318 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Col8a2P25318 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Col8a2P25318 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col8a2P25318 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.28□□□□□ -0.6
Col8a2P25318 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Col8a2P25318 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Col8a2P25318 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Gm12390-201ENSMUST00000117897 397 ntBASIC11.28□□□□□ -0.6
Col8a2P25318 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.28□□□□□ -0.6
Col8a2P25318 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Col8a2P25318 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col8a2P25318 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col8a2P25318 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms