Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.01□□□□□ -0.33
BdnfP21237 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.01□□□□□ -0.33
BdnfP21237 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.01□□□□□ -0.33
BdnfP21237 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.01□□□□□ -0.33
BdnfP21237 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.01□□□□□ -0.33
BdnfP21237 Gm37714-201ENSMUST00000194742 342 ntBASIC13.01□□□□□ -0.33
BdnfP21237 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.01□□□□□ -0.33
BdnfP21237 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.01□□□□□ -0.33
BdnfP21237 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Mir497b-201ENSMUST00000093601 125 ntBASIC13.01□□□□□ -0.33
BdnfP21237 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
BdnfP21237 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
BdnfP21237 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
BdnfP21237 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
BdnfP21237 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
BdnfP21237 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13□□□□□ -0.33
BdnfP21237 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13□□□□□ -0.33
BdnfP21237 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
BdnfP21237 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13□□□□□ -0.33
BdnfP21237 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
BdnfP21237 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13□□□□□ -0.33
BdnfP21237 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13□□□□□ -0.33
BdnfP21237 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
BdnfP21237 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13□□□□□ -0.33
BdnfP21237 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13□□□□□ -0.33
BdnfP21237 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13□□□□□ -0.33
BdnfP21237 Gm7774-201ENSMUST00000200064 533 ntBASIC13□□□□□ -0.33
BdnfP21237 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Gm6916-202ENSMUST00000205523 195 ntBASIC13□□□□□ -0.33
BdnfP21237 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
BdnfP21237 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13□□□□□ -0.33
BdnfP21237 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
BdnfP21237 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BdnfP21237 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
BdnfP21237 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.99□□□□□ -0.33
BdnfP21237 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BdnfP21237 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BdnfP21237 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.99□□□□□ -0.33
BdnfP21237 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BdnfP21237 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
BdnfP21237 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
BdnfP21237 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BdnfP21237 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BdnfP21237 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
BdnfP21237 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BdnfP21237 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BdnfP21237 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.99□□□□□ -0.33
BdnfP21237 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BdnfP21237 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BdnfP21237 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
BdnfP21237 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms