Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sdc1P18828 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sdc1P18828 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.06□□□□□ -0.64
Sdc1P18828 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sdc1P18828 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.06□□□□□ -0.64
Sdc1P18828 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sdc1P18828 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sdc1P18828 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sdc1P18828 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sdc1P18828 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sdc1P18828 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.06□□□□□ -0.64
Sdc1P18828 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sdc1P18828 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sdc1P18828 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sdc1P18828 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sdc1P18828 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sdc1P18828 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sdc1P18828 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.05□□□□□ -0.64
Sdc1P18828 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Sdc1P18828 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Sdc1P18828 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.05□□□□□ -0.64
Sdc1P18828 Gm15957-201ENSMUST00000118893 974 ntBASIC11.05□□□□□ -0.64
Sdc1P18828 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.05□□□□□ -0.64
Sdc1P18828 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.05□□□□□ -0.64
Sdc1P18828 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Gm29741-201ENSMUST00000192667 421 ntBASIC11.05□□□□□ -0.64
Sdc1P18828 Gm6089-201ENSMUST00000197666 938 ntBASIC11.05□□□□□ -0.64
Sdc1P18828 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.05□□□□□ -0.64
Sdc1P18828 Gm45167-201ENSMUST00000208007 322 ntBASIC11.05□□□□□ -0.64
Sdc1P18828 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.05□□□□□ -0.64
Sdc1P18828 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.05□□□□□ -0.64
Sdc1P18828 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sdc1P18828 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.05□□□□□ -0.64
Sdc1P18828 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sdc1P18828 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Sdc1P18828 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sdc1P18828 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Sdc1P18828 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Gm7222-201ENSMUST00000117512 906 ntBASIC11.04□□□□□ -0.64
Sdc1P18828 Gm15565-201ENSMUST00000118890 427 ntBASIC11.04□□□□□ -0.64
Sdc1P18828 Gm13418-201ENSMUST00000119097 944 ntBASIC11.04□□□□□ -0.64
Sdc1P18828 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.04□□□□□ -0.64
Sdc1P18828 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.04□□□□□ -0.64
Sdc1P18828 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.04□□□□□ -0.64
Sdc1P18828 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.04□□□□□ -0.64
Sdc1P18828 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.04□□□□□ -0.64
Sdc1P18828 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sdc1P18828 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sdc1P18828 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.04□□□□□ -0.64
Sdc1P18828 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Sdc1P18828 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.04□□□□□ -0.64
Sdc1P18828 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sdc1P18828 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sdc1P18828 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms