Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cntn1P12960 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cntn1P12960 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.98□□□□□ -0.33
Cntn1P12960 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Cntn1P12960 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Mir1894-201ENSMUST00000122802 81 ntBASIC12.98□□□□□ -0.33
Cntn1P12960 Gm17150-201ENSMUST00000165577 381 ntBASIC12.98□□□□□ -0.33
Cntn1P12960 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Gm27839-201ENSMUST00000184242 106 ntBASIC12.98□□□□□ -0.33
Cntn1P12960 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.98□□□□□ -0.33
Cntn1P12960 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Cntn1P12960 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Cntn1P12960 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cntn1P12960 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Cntn1P12960 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.98□□□□□ -0.33
Cntn1P12960 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Cntn1P12960 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cntn1P12960 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cntn1P12960 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.97□□□□□ -0.33
Cntn1P12960 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.97□□□□□ -0.33
Cntn1P12960 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.97□□□□□ -0.33
Cntn1P12960 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.97□□□□□ -0.33
Cntn1P12960 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.97□□□□□ -0.33
Cntn1P12960 Gm44397-201ENSMUST00000195950 113 ntBASIC12.97□□□□□ -0.33
Cntn1P12960 Gm17794-201ENSMUST00000220252 955 ntBASIC12.97□□□□□ -0.33
Cntn1P12960 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cntn1P12960 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.97□□□□□ -0.33
Cntn1P12960 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.97□□□□□ -0.33
Cntn1P12960 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cntn1P12960 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.97□□□□□ -0.33
Cntn1P12960 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.97□□□□□ -0.33
Cntn1P12960 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.96□□□□□ -0.33
Cntn1P12960 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.96□□□□□ -0.33
Cntn1P12960 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.96□□□□□ -0.33
Cntn1P12960 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Gm29608-201ENSMUST00000190444 463 ntBASIC12.96□□□□□ -0.33
Cntn1P12960 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Gm7287-201ENSMUST00000205267 602 ntBASIC12.96□□□□□ -0.33
Cntn1P12960 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.96□□□□□ -0.33
Cntn1P12960 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.96□□□□□ -0.33
Cntn1P12960 Gm17330-201ENSMUST00000221047 165 ntBASIC12.96□□□□□ -0.33
Cntn1P12960 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.96□□□□□ -0.33
Cntn1P12960 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cntn1P12960 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cntn1P12960 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cntn1P12960 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cntn1P12960 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cntn1P12960 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms