Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
P01788 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
P01788 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.69□□□□□ -0.7
P01788 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
P01788 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.69□□□□□ -0.7
P01788 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
P01788 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.69□□□□□ -0.7
P01788 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.69□□□□□ -0.7
P01788 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.69□□□□□ -0.7
P01788 Mir6990-201ENSMUST00000183724 91 ntBASIC10.69□□□□□ -0.7
P01788 Gm16476-201ENSMUST00000221544 139 ntBASIC10.69□□□□□ -0.7
P01788 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
P01788 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
P01788 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
P01788 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01788 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
P01788 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P01788 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.68□□□□□ -0.7
P01788 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
P01788 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.68□□□□□ -0.7
P01788 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P01788 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.68□□□□□ -0.7
P01788 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
P01788 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P01788 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.68□□□□□ -0.7
P01788 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.68□□□□□ -0.7
P01788 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.68□□□□□ -0.7
P01788 Gm43125-201ENSMUST00000201724 730 ntBASIC10.68□□□□□ -0.7
P01788 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.68□□□□□ -0.7
P01788 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.68□□□□□ -0.7
P01788 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
P01788 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
P01788 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
P01788 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
P01788 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01788 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01788 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P01788 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P01788 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01788 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.67□□□□□ -0.7
P01788 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01788 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01788 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01788 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P01788 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
P01788 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01788 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.67□□□□□ -0.7
P01788 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P01788 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms