Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.74□□□□□ -0.69
P01643 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.74□□□□□ -0.69
P01643 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.74□□□□□ -0.69
P01643 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.74□□□□□ -0.69
P01643 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.74□□□□□ -0.69
P01643 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.74□□□□□ -0.69
P01643 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
P01643 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
P01643 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
P01643 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
P01643 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P01643 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
P01643 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Snora78-201ENSMUST00000158630 128 ntBASIC10.73□□□□□ -0.69
P01643 Mir1938-201ENSMUST00000158746 100 ntBASIC10.73□□□□□ -0.69
P01643 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.73□□□□□ -0.69
P01643 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.73□□□□□ -0.69
P01643 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.73□□□□□ -0.69
P01643 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.73□□□□□ -0.69
P01643 Gm40466-201ENSMUST00000212174 422 ntBASIC10.73□□□□□ -0.69
P01643 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.73□□□□□ -0.69
P01643 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.73□□□□□ -0.69
P01643 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
P01643 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.73□□□□□ -0.69
P01643 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
P01643 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.73□□□□□ -0.69
P01643 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
P01643 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
P01643 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
P01643 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.73□□□□□ -0.69
P01643 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC10.73□□□□□ -0.69
P01643 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
P01643 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
P01643 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01643 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P01643 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01643 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
P01643 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.72□□□□□ -0.69
P01643 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P01643 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01643 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P01643 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01643 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01643 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
P01643 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01643 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
P01643 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01643 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01643 Gm8213-201ENSMUST00000118191 441 ntBASIC10.72□□□□□ -0.69
P01643 Gm10156-201ENSMUST00000122364 462 ntBASIC10.72□□□□□ -0.69
P01643 Gm43818-201ENSMUST00000200605 466 ntBASIC10.72□□□□□ -0.69
P01643 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.72□□□□□ -0.69
P01643 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01643 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms