Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hcn1O88704 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13□□□□□ -0.33
Hcn1O88704 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcn1O88704 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Hcn1O88704 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Hcn1O88704 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hcn1O88704 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Syt7-204ENSMUST00000223586 1344 ntBASIC12.99□□□□□ -0.33
Hcn1O88704 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.99□□□□□ -0.33
Hcn1O88704 Gm24694-201ENSMUST00000180054 110 ntBASIC12.99□□□□□ -0.33
Hcn1O88704 Gm27663-201ENSMUST00000184839 110 ntBASIC12.99□□□□□ -0.33
Hcn1O88704 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.99□□□□□ -0.33
Hcn1O88704 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.99□□□□□ -0.33
Hcn1O88704 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.99□□□□□ -0.33
Hcn1O88704 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.99□□□□□ -0.33
Hcn1O88704 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Hcn1O88704 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Hcn1O88704 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.99□□□□□ -0.33
Hcn1O88704 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hcn1O88704 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hcn1O88704 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcn1O88704 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.98□□□□□ -0.33
Hcn1O88704 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.98□□□□□ -0.33
Hcn1O88704 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hcn1O88704 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.98□□□□□ -0.33
Hcn1O88704 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.98□□□□□ -0.33
Hcn1O88704 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.98□□□□□ -0.33
Hcn1O88704 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hcn1O88704 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Gm15393-201ENSMUST00000120499 219 ntBASIC12.98□□□□□ -0.33
Hcn1O88704 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.98□□□□□ -0.33
Hcn1O88704 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hcn1O88704 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Gm29667-201ENSMUST00000190817 490 ntBASIC12.98□□□□□ -0.33
Hcn1O88704 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Hcn1O88704 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.98□□□□□ -0.33
Hcn1O88704 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.98□□□□□ -0.33
Hcn1O88704 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hcn1O88704 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.98□□□□□ -0.33
Hcn1O88704 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Hcn1O88704 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Hcn1O88704 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcn1O88704 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.97□□□□□ -0.33
Hcn1O88704 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hcn1O88704 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.97□□□□□ -0.33
Hcn1O88704 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.97□□□□□ -0.33
Hcn1O88704 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Hcn1O88704 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.97□□□□□ -0.33
Hcn1O88704 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms