Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Gm14127-201ENSMUST00000117906 678 ntBASIC13.28□□□□□ -0.28
ClppO88696 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.28□□□□□ -0.28
ClppO88696 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.28□□□□□ -0.28
ClppO88696 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.28□□□□□ -0.28
ClppO88696 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.28□□□□□ -0.28
ClppO88696 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ClppO88696 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.28□□□□□ -0.28
ClppO88696 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ClppO88696 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClppO88696 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClppO88696 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClppO88696 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClppO88696 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClppO88696 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClppO88696 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClppO88696 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClppO88696 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ClppO88696 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClppO88696 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClppO88696 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClppO88696 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ClppO88696 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
ClppO88696 Gm12341-201ENSMUST00000119724 503 ntBASIC13.27□□□□□ -0.29
ClppO88696 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Mir7654-201ENSMUST00000185082 70 ntBASIC13.27□□□□□ -0.29
ClppO88696 Gm37714-201ENSMUST00000194742 342 ntBASIC13.27□□□□□ -0.29
ClppO88696 Gm18905-201ENSMUST00000205454 928 ntBASIC13.27□□□□□ -0.29
ClppO88696 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.27□□□□□ -0.29
ClppO88696 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
ClppO88696 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ClppO88696 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ClppO88696 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ClppO88696 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.27□□□□□ -0.29
ClppO88696 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClppO88696 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
ClppO88696 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
ClppO88696 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Gm15240-201ENSMUST00000118156 720 ntBASIC13.26□□□□□ -0.29
ClppO88696 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.26□□□□□ -0.29
ClppO88696 Gm12138-201ENSMUST00000122180 951 ntBASIC13.26□□□□□ -0.29
ClppO88696 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ClppO88696 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ClppO88696 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ClppO88696 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.26□□□□□ -0.29
ClppO88696 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.26□□□□□ -0.29
ClppO88696 Gm18027-201ENSMUST00000218947 619 ntBASIC13.26□□□□□ -0.29
ClppO88696 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ClppO88696 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ClppO88696 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ClppO88696 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ClppO88696 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ClppO88696 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ClppO88696 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ClppO88696 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms