Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Gm8566-201ENSMUST00000120174 465 ntBASIC12.03□□□□□ -0.48
Col5a1O88207 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.03□□□□□ -0.48
Col5a1O88207 Gm12363-201ENSMUST00000122250 668 ntBASIC12.03□□□□□ -0.48
Col5a1O88207 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.03□□□□□ -0.48
Col5a1O88207 Gm27438-201ENSMUST00000183480 110 ntBASIC12.03□□□□□ -0.48
Col5a1O88207 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.03□□□□□ -0.48
Col5a1O88207 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.03□□□□□ -0.48
Col5a1O88207 Gm30285-201ENSMUST00000214614 422 ntBASIC12.03□□□□□ -0.48
Col5a1O88207 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.03□□□□□ -0.48
Col5a1O88207 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.03□□□□□ -0.48
Col5a1O88207 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.03□□□□□ -0.48
Col5a1O88207 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col5a1O88207 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Col5a1O88207 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col5a1O88207 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col5a1O88207 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Col5a1O88207 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Col5a1O88207 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col5a1O88207 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Col5a1O88207 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.02□□□□□ -0.48
Col5a1O88207 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.02□□□□□ -0.48
Col5a1O88207 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.02□□□□□ -0.48
Col5a1O88207 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Col5a1O88207 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.02□□□□□ -0.48
Col5a1O88207 Gm6407-201ENSMUST00000176468 549 ntBASIC12.02□□□□□ -0.48
Col5a1O88207 Mospd4-201ENSMUST00000180618 576 ntBASIC12.02□□□□□ -0.48
Col5a1O88207 Gm45770-201ENSMUST00000212105 616 ntBASIC12.02□□□□□ -0.48
Col5a1O88207 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col5a1O88207 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Col5a1O88207 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Col5a1O88207 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Col5a1O88207 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col5a1O88207 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col5a1O88207 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col5a1O88207 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Col5a1O88207 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Col5a1O88207 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Col5a1O88207 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col5a1O88207 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col5a1O88207 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col5a1O88207 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.02□□□□□ -0.49
Col5a1O88207 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.02□□□□□ -0.49
Col5a1O88207 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col5a1O88207 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col5a1O88207 Gm23200-201ENSMUST00000104379 132 ntBASIC12.02□□□□□ -0.49
Col5a1O88207 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Gm27023-201ENSMUST00000182372 285 ntBASIC12.02□□□□□ -0.49
Col5a1O88207 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Gm37835-201ENSMUST00000193305 361 ntBASIC12.02□□□□□ -0.49
Col5a1O88207 Gm38317-201ENSMUST00000195564 343 ntBASIC12.02□□□□□ -0.49
Col5a1O88207 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col5a1O88207 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col5a1O88207 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC12.02□□□□□ -0.49
Col5a1O88207 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Col5a1O88207 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.01□□□□□ -0.49
Col5a1O88207 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.01□□□□□ -0.49
Col5a1O88207 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col5a1O88207 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms