Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm6983-201ENSMUST00000214912 628 ntBASIC13.38□□□□□ -0.27
Pdlim1O70400 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.38□□□□□ -0.27
Pdlim1O70400 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.38□□□□□ -0.27
Pdlim1O70400 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim1O70400 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim1O70400 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pdlim1O70400 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Pdlim1O70400 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim1O70400 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.38□□□□□ -0.27
Pdlim1O70400 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pdlim1O70400 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim1O70400 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim1O70400 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim1O70400 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.38□□□□□ -0.27
Pdlim1O70400 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pdlim1O70400 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim1O70400 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim1O70400 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pdlim1O70400 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.37□□□□□ -0.27
Pdlim1O70400 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pdlim1O70400 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Pdlim1O70400 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.37□□□□□ -0.27
Pdlim1O70400 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.37□□□□□ -0.27
Pdlim1O70400 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pdlim1O70400 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pdlim1O70400 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.37□□□□□ -0.27
Pdlim1O70400 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.37□□□□□ -0.27
Pdlim1O70400 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pdlim1O70400 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim1O70400 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim1O70400 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.36□□□□□ -0.27
Pdlim1O70400 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
Pdlim1O70400 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim1O70400 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim1O70400 Gm13689-201ENSMUST00000119360 685 ntBASIC13.36□□□□□ -0.27
Pdlim1O70400 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.36□□□□□ -0.27
Pdlim1O70400 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Pdlim1O70400 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.36□□□□□ -0.27
Pdlim1O70400 Gm15429-201ENSMUST00000151268 798 ntBASIC13.36□□□□□ -0.27
Pdlim1O70400 Gm23984-201ENSMUST00000157139 203 ntBASIC13.36□□□□□ -0.27
Pdlim1O70400 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.36□□□□□ -0.27
Pdlim1O70400 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pdlim1O70400 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.36□□□□□ -0.27
Pdlim1O70400 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim1O70400 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.36□□□□□ -0.27
Pdlim1O70400 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Pdlim1O70400 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim1O70400 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms