Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Mir698-201ENSMUST00000102164 109 ntBASIC11.13□□□□□ -0.63
Tnfsf12O54907 Gm4875-201ENSMUST00000118257 786 ntBASIC11.13□□□□□ -0.63
Tnfsf12O54907 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Gm27321-201ENSMUST00000185021 205 ntBASIC11.13□□□□□ -0.63
Tnfsf12O54907 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.13□□□□□ -0.63
Tnfsf12O54907 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.13□□□□□ -0.63
Tnfsf12O54907 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Gm7775-201ENSMUST00000218871 853 ntBASIC11.13□□□□□ -0.63
Tnfsf12O54907 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf12O54907 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.12□□□□□ -0.63
Tnfsf12O54907 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Gm12585-201ENSMUST00000117307 290 ntBASIC11.12□□□□□ -0.63
Tnfsf12O54907 Gm13385-201ENSMUST00000121089 220 ntBASIC11.12□□□□□ -0.63
Tnfsf12O54907 Gm12151-201ENSMUST00000121374 290 ntBASIC11.12□□□□□ -0.63
Tnfsf12O54907 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.12□□□□□ -0.63
Tnfsf12O54907 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf12O54907 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf12O54907 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf12O54907 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.11□□□□□ -0.63
Tnfsf12O54907 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf12O54907 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf12O54907 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf12O54907 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf12O54907 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfsf12O54907 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfsf12O54907 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf12O54907 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsf12O54907 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms