Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col15a1O35206 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col15a1O35206 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
Col15a1O35206 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Col15a1O35206 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col15a1O35206 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col15a1O35206 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col15a1O35206 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.14■□□□□ 0.33
Col15a1O35206 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Col15a1O35206 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Col15a1O35206 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Tmed9-203ENSMUST00000224741 1450 ntBASIC17.14■□□□□ 0.33
Col15a1O35206 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Gm12502-201ENSMUST00000120197 444 ntBASIC17.14■□□□□ 0.33
Col15a1O35206 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.14■□□□□ 0.33
Col15a1O35206 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Col15a1O35206 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Col15a1O35206 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.14■□□□□ 0.33
Col15a1O35206 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.14■□□□□ 0.33
Col15a1O35206 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col15a1O35206 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.14■□□□□ 0.33
Col15a1O35206 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col15a1O35206 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.14■□□□□ 0.33
Col15a1O35206 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col15a1O35206 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC17.14■□□□□ 0.33
Col15a1O35206 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.14■□□□□ 0.33
Col15a1O35206 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col15a1O35206 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.13■□□□□ 0.33
Col15a1O35206 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Col15a1O35206 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.13■□□□□ 0.33
Col15a1O35206 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Col15a1O35206 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Col15a1O35206 Gm10434-201ENSMUST00000101158 471 ntBASIC17.13■□□□□ 0.33
Col15a1O35206 Gm25214-201ENSMUST00000104573 129 ntBASIC17.13■□□□□ 0.33
Col15a1O35206 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Gm12012-201ENSMUST00000118857 1066 ntBASIC17.13■□□□□ 0.33
Col15a1O35206 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC17.13■□□□□ 0.33
Col15a1O35206 Gm6458-201ENSMUST00000211573 635 ntBASIC17.13■□□□□ 0.33
Col15a1O35206 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.13■□□□□ 0.33
Col15a1O35206 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col15a1O35206 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Col15a1O35206 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.12■□□□□ 0.33
Col15a1O35206 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col15a1O35206 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.12■□□□□ 0.33
Col15a1O35206 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col15a1O35206 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC17.12■□□□□ 0.33
Col15a1O35206 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC17.12■□□□□ 0.33
Col15a1O35206 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms