Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Alx4O35137 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Alx4O35137 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Gm14494-201ENSMUST00000118786 435 ntBASIC12.08□□□□□ -0.48
Alx4O35137 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.08□□□□□ -0.48
Alx4O35137 Gm15653-201ENSMUST00000119247 907 ntBASIC12.08□□□□□ -0.48
Alx4O35137 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.08□□□□□ -0.48
Alx4O35137 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.08□□□□□ -0.48
Alx4O35137 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.08□□□□□ -0.48
Alx4O35137 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.08□□□□□ -0.48
Alx4O35137 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Alx4O35137 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx4O35137 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Alx4O35137 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Alx4O35137 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Alx4O35137 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Alx4O35137 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Gm24543-201ENSMUST00000103867 82 ntBASIC12.07□□□□□ -0.48
Alx4O35137 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Alx4O35137 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.07□□□□□ -0.48
Alx4O35137 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.07□□□□□ -0.48
Alx4O35137 Gm15467-201ENSMUST00000120582 445 ntBASIC12.07□□□□□ -0.48
Alx4O35137 Gm13365-201ENSMUST00000121188 973 ntBASIC12.07□□□□□ -0.48
Alx4O35137 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.07□□□□□ -0.48
Alx4O35137 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Mir7221-201ENSMUST00000184009 72 ntBASIC12.07□□□□□ -0.48
Alx4O35137 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Alx4O35137 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Alx4O35137 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.07□□□□□ -0.48
Alx4O35137 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Alx4O35137 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.07□□□□□ -0.48
Alx4O35137 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Alx4O35137 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Alx4O35137 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Alx4O35137 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx4O35137 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx4O35137 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx4O35137 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx4O35137 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx4O35137 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.06□□□□□ -0.48
Alx4O35137 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Alx4O35137 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx4O35137 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx4O35137 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx4O35137 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Alx4O35137 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Alx4O35137 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Alx4O35137 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Alx4O35137 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.06□□□□□ -0.48
Alx4O35137 Gm6912-201ENSMUST00000117218 544 ntBASIC12.06□□□□□ -0.48
Alx4O35137 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Alx4O35137 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms