Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm10553J3QPF1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Gm15678-201ENSMUST00000117573 960 ntBASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Gm11918-201ENSMUST00000121660 179 ntBASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Gm5745-201ENSMUST00000183748 313 ntBASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Gm45384-201ENSMUST00000210451 277 ntBASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Gm10553J3QPF1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Gm10553J3QPF1 Gm13689-201ENSMUST00000119360 685 ntBASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms