Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc188F6WEU2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc188F6WEU2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Gm37666-201ENSMUST00000194110 866 ntBASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc188F6WEU2 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Gm25545-201ENSMUST00000122673 323 ntBASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Gm20392-201ENSMUST00000173047 701 ntBASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Gm34023-201ENSMUST00000195539 217 ntBASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Gm43916-201ENSMUST00000205062 967 ntBASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Gm5369-201ENSMUST00000217499 588 ntBASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Carlr-201ENSMUST00000181515 2574 ntBASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc188F6WEU2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc188F6WEU2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc188F6WEU2 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc188F6WEU2 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.52□□□□□ -0.25
Ccdc188F6WEU2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ccdc188F6WEU2 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Ccdc188F6WEU2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc188F6WEU2 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.52□□□□□ -0.25
Ccdc188F6WEU2 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.52□□□□□ -0.25
Ccdc188F6WEU2 Gm25043-201ENSMUST00000158604 212 ntBASIC13.52□□□□□ -0.25
Ccdc188F6WEU2 Gm25072-201ENSMUST00000175233 235 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms