Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ApobE9Q414 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC8.04□□□□□ -1.12
ApobE9Q414 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
ApobE9Q414 Rprl1-202ENSMUST00000198476 238 ntBASIC8.03□□□□□ -1.12
ApobE9Q414 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC8.03□□□□□ -1.12
ApobE9Q414 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC8.03□□□□□ -1.12
ApobE9Q414 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
ApobE9Q414 Gm8546-201ENSMUST00000178288 1264 ntBASIC8.03□□□□□ -1.12
ApobE9Q414 Gm27046-201ENSMUST00000182160 463 ntBASIC8.03□□□□□ -1.12
ApobE9Q414 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Gm5989-201ENSMUST00000096092 2077 ntBASIC8.03□□□□□ -1.12
ApobE9Q414 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
ApobE9Q414 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC8.03□□□□□ -1.12
ApobE9Q414 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC8.03□□□□□ -1.12
ApobE9Q414 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC8.03□□□□□ -1.12
ApobE9Q414 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC8.03□□□□□ -1.12
ApobE9Q414 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC8.03□□□□□ -1.12
ApobE9Q414 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC8.03□□□□□ -1.12
ApobE9Q414 Gm45770-201ENSMUST00000212105 616 ntBASIC8.03□□□□□ -1.12
ApobE9Q414 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC8.03□□□□□ -1.12
ApobE9Q414 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
ApobE9Q414 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ApobE9Q414 Gm37133-201ENSMUST00000192705 1922 ntBASIC8.02□□□□□ -1.12
ApobE9Q414 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
ApobE9Q414 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
ApobE9Q414 Gm12201-201ENSMUST00000120657 1234 ntBASIC8.02□□□□□ -1.12
ApobE9Q414 Gm12291-201ENSMUST00000121627 311 ntBASIC8.02□□□□□ -1.12
ApobE9Q414 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC8.02□□□□□ -1.12
ApobE9Q414 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC8.02□□□□□ -1.12
ApobE9Q414 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
ApobE9Q414 Gm8018-201ENSMUST00000173536 789 ntBASIC8.02□□□□□ -1.12
ApobE9Q414 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC8.02□□□□□ -1.12
ApobE9Q414 Gm9555-201ENSMUST00000200908 583 ntBASIC8.02□□□□□ -1.12
ApobE9Q414 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
ApobE9Q414 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
ApobE9Q414 Gm19208-201ENSMUST00000213861 912 ntBASIC8.02□□□□□ -1.12
ApobE9Q414 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
ApobE9Q414 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
ApobE9Q414 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
ApobE9Q414 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
ApobE9Q414 Gm45495-201ENSMUST00000200940 1700 ntBASIC8.02□□□□□ -1.12
ApobE9Q414 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
ApobE9Q414 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
ApobE9Q414 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
ApobE9Q414 Gm10676-201ENSMUST00000098778 3221 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
ApobE9Q414 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
ApobE9Q414 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC8.02□□□□□ -1.13
ApobE9Q414 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
ApobE9Q414 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
ApobE9Q414 Gm17812-201ENSMUST00000204935 318 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 Gm18393-201ENSMUST00000208349 1131 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
ApobE9Q414 AC173210.1-201ENSMUST00000222341 1131 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 n-R5s77-201ENSMUST00000083757 119 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
ApobE9Q414 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC8.02□□□□□ -1.13
ApobE9Q414 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
ApobE9Q414 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
ApobE9Q414 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
ApobE9Q414 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Gm18734-201ENSMUST00000172937 808 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 Gm19353-201ENSMUST00000184561 445 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC8.02□□□□□ -1.13
ApobE9Q414 Gm44651-201ENSMUST00000207343 372 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms