Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh17E9PXF0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Gm15371-201ENSMUST00000117057 784 ntBASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh17E9PXF0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Gm38223-201ENSMUST00000194484 695 ntBASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Gm9899-201ENSMUST00000065519 555 ntBASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh17E9PXF0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh17E9PXF0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh17E9PXF0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh17E9PXF0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh17E9PXF0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms