Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc22a28B2RT89 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Gm27397-201ENSMUST00000184997 107 ntBASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Chchd1-203ENSMUST00000224633 557 ntBASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc22a28B2RT89 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Gm27772-201ENSMUST00000184900 187 ntBASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Gm43514-201ENSMUST00000198852 424 ntBASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc22a28B2RT89 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc22a28B2RT89 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms