Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Gm8410-201ENSMUST00000117225 605 ntBASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Gm18766-201ENSMUST00000189811 808 ntBASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 AC151286.1-201ENSMUST00000198489 145 ntBASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ighv1-11A0A0A6YWI9 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.59□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Gm44891-201ENSMUST00000208817 2223 ntBASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Gm37714-201ENSMUST00000194742 342 ntBASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Gm5312-201ENSMUST00000203728 547 ntBASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 AC140397.2-201ENSMUST00000224213 834 ntBASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Chchd1-203ENSMUST00000224633 557 ntBASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Gm20632-201ENSMUST00000176760 2427 ntBASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ighv1-11A0A0A6YWI9 Gm45242-201ENSMUST00000210666 2129 ntBASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms