Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 AC164565.1-201ENSMUST00000217520 1484 ntBASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Gm9182-201ENSMUST00000217829 639 ntBASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 AC126549.2-201ENSMUST00000223997 1976 ntBASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav8-1A0A075B641 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Gm5763-201ENSMUST00000155951 1530 ntBASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Gm17807-201ENSMUST00000186869 298 ntBASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav8-1A0A075B641 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Gm7222-201ENSMUST00000117512 906 ntBASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Gm13418-201ENSMUST00000119097 944 ntBASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms