Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Gm24694-201ENSMUST00000180054 110 ntBASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Gm27663-201ENSMUST00000184839 110 ntBASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Gm9797-201ENSMUST00000052902 613 ntBASIC13.57□□□□□ -0.24
H2afb2S4R1M3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
H2afb2S4R1M3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb2S4R1M3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Gm20949-201ENSMUST00000206478 952 ntBASIC13.55□□□□□ -0.24
H2afb2S4R1M3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Syt7-204ENSMUST00000223586 1344 ntBASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms