Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six6Q9QZ28 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six6Q9QZ28 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Six6Q9QZ28 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.45□□□□□ -0.58
Six6Q9QZ28 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.45□□□□□ -0.58
Six6Q9QZ28 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Six6Q9QZ28 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.45□□□□□ -0.58
Six6Q9QZ28 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Gm12882-201ENSMUST00000121696 517 ntBASIC11.45□□□□□ -0.58
Six6Q9QZ28 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.45□□□□□ -0.58
Six6Q9QZ28 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.45□□□□□ -0.58
Six6Q9QZ28 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Six6Q9QZ28 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.44□□□□□ -0.58
Six6Q9QZ28 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Six6Q9QZ28 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.43□□□□□ -0.58
Six6Q9QZ28 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.43□□□□□ -0.58
Six6Q9QZ28 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms