Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SrfQ9JM73 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SrfQ9JM73 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.78□□□□□ -0.36
SrfQ9JM73 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SrfQ9JM73 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
SrfQ9JM73 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SrfQ9JM73 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.77□□□□□ -0.36
SrfQ9JM73 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.77□□□□□ -0.36
SrfQ9JM73 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SrfQ9JM73 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SrfQ9JM73 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SrfQ9JM73 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SrfQ9JM73 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
SrfQ9JM73 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SrfQ9JM73 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SrfQ9JM73 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SrfQ9JM73 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SrfQ9JM73 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SrfQ9JM73 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SrfQ9JM73 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SrfQ9JM73 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Gm8805-201ENSMUST00000117848 313 ntBASIC12.77□□□□□ -0.37
SrfQ9JM73 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.77□□□□□ -0.37
SrfQ9JM73 Gm20482-202ENSMUST00000174729 825 ntBASIC12.77□□□□□ -0.37
SrfQ9JM73 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.77□□□□□ -0.37
SrfQ9JM73 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.77□□□□□ -0.37
SrfQ9JM73 Gm26461-201ENSMUST00000175064 290 ntBASIC12.77□□□□□ -0.37
SrfQ9JM73 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SrfQ9JM73 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.77□□□□□ -0.37
SrfQ9JM73 Gm4768-201ENSMUST00000206199 686 ntBASIC12.77□□□□□ -0.37
SrfQ9JM73 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.77□□□□□ -0.37
SrfQ9JM73 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.77□□□□□ -0.37
SrfQ9JM73 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SrfQ9JM73 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.77□□□□□ -0.37
SrfQ9JM73 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SrfQ9JM73 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
SrfQ9JM73 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.76□□□□□ -0.37
SrfQ9JM73 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.76□□□□□ -0.37
SrfQ9JM73 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.76□□□□□ -0.37
SrfQ9JM73 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SrfQ9JM73 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SrfQ9JM73 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.76□□□□□ -0.37
SrfQ9JM73 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Gm6222-202ENSMUST00000182143 629 ntBASIC12.76□□□□□ -0.37
SrfQ9JM73 Gm6621-201ENSMUST00000193251 772 ntBASIC12.76□□□□□ -0.37
SrfQ9JM73 Gm5781-201ENSMUST00000219792 443 ntBASIC12.76□□□□□ -0.37
SrfQ9JM73 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.76□□□□□ -0.37
SrfQ9JM73 Gm19163-201ENSMUST00000223313 780 ntBASIC12.76□□□□□ -0.37
SrfQ9JM73 AC132881.2-201ENSMUST00000225474 709 ntBASIC12.76□□□□□ -0.37
SrfQ9JM73 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
SrfQ9JM73 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.76□□□□□ -0.37
SrfQ9JM73 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.76□□□□□ -0.37
SrfQ9JM73 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SrfQ9JM73 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SrfQ9JM73 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SrfQ9JM73 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SrfQ9JM73 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SrfQ9JM73 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SrfQ9JM73 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SrfQ9JM73 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SrfQ9JM73 Gm11222-201ENSMUST00000119005 738 ntBASIC12.75□□□□□ -0.37
SrfQ9JM73 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms