Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm8515-201ENSMUST00000194852 576 ntBASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3aQ9JKX8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Gm2495-201ENSMUST00000191160 466 ntBASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Gm44397-201ENSMUST00000195950 113 ntBASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Gm26315-201ENSMUST00000083890 321 ntBASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.03□□□□□ -0.32
Upk3aQ9JKX8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3aQ9JKX8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3aQ9JKX8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3aQ9JKX8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3aQ9JKX8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3aQ9JKX8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3aQ9JKX8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3aQ9JKX8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.02□□□□□ -0.32
Upk3aQ9JKX8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3aQ9JKX8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Gm28911-201ENSMUST00000188837 117 ntBASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Gm9908-201ENSMUST00000211534 448 ntBASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3aQ9JKX8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms