Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Gm9924-202ENSMUST00000192760 2311 ntBASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 AC166051.1-201ENSMUST00000214313 210 ntBASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Gm45930-201ENSMUST00000221330 292 ntBASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 n-R5s195-201ENSMUST00000082891 119 ntBASIC18.48■□□□□ 0.55
Cpsf1Q9EPU4 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Gm12846-201ENSMUST00000120431 1373 ntBASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Gm25261-201ENSMUST00000157416 134 ntBASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Cpsf1Q9EPU4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Gm15459-201ENSMUST00000117405 1941 ntBASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Gm8355-201ENSMUST00000177767 1941 ntBASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Gm25927-201ENSMUST00000175058 117 ntBASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf1Q9EPU4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cpsf1Q9EPU4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Gm8805-201ENSMUST00000117848 313 ntBASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf1Q9EPU4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Gm7172-201ENSMUST00000218047 1152 ntBASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 AC022775.2-201ENSMUST00000227885 646 ntBASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms