Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpne8Q9DC53 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.15□□□□□ -0.15
Cpne8Q9DC53 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.15□□□□□ -0.15
Cpne8Q9DC53 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Gm17795-201ENSMUST00000214505 757 ntBASIC14.14□□□□□ -0.15
Cpne8Q9DC53 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Cpne8Q9DC53 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cpne8Q9DC53 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Gm21854-201ENSMUST00000179901 471 ntBASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Gm18905-201ENSMUST00000205454 928 ntBASIC14.12□□□□□ -0.15
Cpne8Q9DC53 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cpne8Q9DC53 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms