Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
Chmp4bQ9D8B3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.08■□□□□ 0.32
Chmp4bQ9D8B3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4bQ9D8B3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4bQ9D8B3 Gm9797-201ENSMUST00000052902 613 ntBASIC17.08■□□□□ 0.32
Chmp4bQ9D8B3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4bQ9D8B3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4bQ9D8B3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4bQ9D8B3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4bQ9D8B3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp4bQ9D8B3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Mir874-201ENSMUST00000104769 76 ntBASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Gm12151-201ENSMUST00000121374 290 ntBASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp4bQ9D8B3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Gm5161-201ENSMUST00000075243 853 ntBASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp4bQ9D8B3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Gm14057-201ENSMUST00000120631 482 ntBASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Gm38144-201ENSMUST00000192790 465 ntBASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.05■□□□□ 0.32
Chmp4bQ9D8B3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms