Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Gm24543-201ENSMUST00000103867 82 ntBASIC13.67□□□□□ -0.22
Ccdc130Q9D516 AA543401-201ENSMUST00000164248 1269 ntBASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Gm16476-201ENSMUST00000221544 139 ntBASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.67□□□□□ -0.22
Ccdc130Q9D516 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Gm12428-201ENSMUST00000119844 727 ntBASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Gm44608-201ENSMUST00000206827 855 ntBASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc130Q9D516 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.65□□□□□ -0.22
Ccdc130Q9D516 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Gm22175-201ENSMUST00000175007 78 ntBASIC13.65□□□□□ -0.22
Ccdc130Q9D516 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms