Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd1Q9D0E3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd1Q9D0E3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd1Q9D0E3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd1Q9D0E3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd1Q9D0E3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd1Q9D0E3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.3□□□□□ -0.12
Lysmd1Q9D0E3 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.3□□□□□ -0.12
Lysmd1Q9D0E3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Lysmd1Q9D0E3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd1Q9D0E3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Gm32999-201ENSMUST00000192693 562 ntBASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Gm5298-201ENSMUST00000201122 892 ntBASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Gm6722-201ENSMUST00000221586 390 ntBASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Arhgef33-210ENSMUST00000225548 456 ntBASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd1Q9D0E3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Gm23949-201ENSMUST00000104027 127 ntBASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Gm22138-201ENSMUST00000158748 128 ntBASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Gm45120-201ENSMUST00000208880 408 ntBASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lysmd1Q9D0E3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd1Q9D0E3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd1Q9D0E3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd1Q9D0E3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd1Q9D0E3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd1Q9D0E3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd1Q9D0E3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd1Q9D0E3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd1Q9D0E3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd1Q9D0E3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd1Q9D0E3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lysmd1Q9D0E3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lysmd1Q9D0E3 Gm12058-201ENSMUST00000118614 437 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms