Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Gm15770-201ENSMUST00000117498 584 ntBASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Gm27331-201ENSMUST00000183705 60 ntBASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Gm43133-201ENSMUST00000197472 463 ntBASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Snora73a-201ENSMUST00000082453 205 ntBASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Prpf8Q99PV0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Gm38671-201ENSMUST00000200573 130 ntBASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Prpf8Q99PV0 Gm12203-201ENSMUST00000118235 598 ntBASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Gm12209-201ENSMUST00000120089 596 ntBASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Gm29127-201ENSMUST00000188304 517 ntBASIC11.1□□□□□ -0.63
Prpf8Q99PV0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Prpf8Q99PV0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms