Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Gm44344-201ENSMUST00000200287 129 ntBASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf111Q99ML9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Gm13223-201ENSMUST00000118609 747 ntBASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf111Q99ML9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Gm13453-201ENSMUST00000118708 357 ntBASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Gm14767-201ENSMUST00000121559 586 ntBASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Gm33320-201ENSMUST00000192232 530 ntBASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Gm18027-201ENSMUST00000218947 619 ntBASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.15□□□□□ -0.3
Rnf111Q99ML9 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.15□□□□□ -0.3
Rnf111Q99ML9 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms