Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Gm5779-201ENSMUST00000218467 910 ntBASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Mir1897-201ENSMUST00000122581 272 ntBASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Gm25925-201ENSMUST00000158314 306 ntBASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Mir497b-201ENSMUST00000093601 125 ntBASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkd1Q99MH6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkd1Q99MH6 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms