Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.23□□□□□ -0.13
Clp1Q99LI9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.23□□□□□ -0.13
Clp1Q99LI9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Gm11964-201ENSMUST00000120982 444 ntBASIC14.23□□□□□ -0.13
Clp1Q99LI9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.23□□□□□ -0.13
Clp1Q99LI9 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Mir3547-201ENSMUST00000175461 88 ntBASIC14.23□□□□□ -0.13
Clp1Q99LI9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Gm2383-201ENSMUST00000181461 807 ntBASIC14.23□□□□□ -0.13
Clp1Q99LI9 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.23□□□□□ -0.13
Clp1Q99LI9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.23□□□□□ -0.13
Clp1Q99LI9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.23□□□□□ -0.13
Clp1Q99LI9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clp1Q99LI9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clp1Q99LI9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.22□□□□□ -0.13
Clp1Q99LI9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.22□□□□□ -0.13
Clp1Q99LI9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.22□□□□□ -0.13
Clp1Q99LI9 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Gm11222-201ENSMUST00000119005 738 ntBASIC14.22□□□□□ -0.13
Clp1Q99LI9 Gm12997-201ENSMUST00000120207 640 ntBASIC14.22□□□□□ -0.13
Clp1Q99LI9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Gm5781-201ENSMUST00000219792 443 ntBASIC14.22□□□□□ -0.13
Clp1Q99LI9 Morn2-202ENSMUST00000227729 656 ntBASIC14.22□□□□□ -0.13
Clp1Q99LI9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.22□□□□□ -0.13
Clp1Q99LI9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.21□□□□□ -0.13
Clp1Q99LI9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Gm12363-201ENSMUST00000122250 668 ntBASIC14.21□□□□□ -0.13
Clp1Q99LI9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.21□□□□□ -0.13
Clp1Q99LI9 Gm18753-201ENSMUST00000201000 566 ntBASIC14.21□□□□□ -0.13
Clp1Q99LI9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.21□□□□□ -0.13
Clp1Q99LI9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms